Version 20 (modified by yn, 16 years ago)

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Day 3: Visualization Workgroup Discussion

Hands on: March 19 AM at the seminar room

Tools

  • Network
    • Cytoscape
    • E-Cell 3D was presented by Kazuharu@Keio (  http://ecell3d.iab.keio.ac.jp/ )
    • GraphViz
    • Biocichlid
    • EdgeExpressDB (eeDB) was presented by Jessica@RIKEN
  • Expression
    • cytoscape
    • Genespring
    • TMeV
    • PREP+07 (?)
    • bluejay
    • Biocichlid
    • eeDB
    • GenoDive (maybe ..)
  • Genome
    • Ensembl
    • UCSC
    • GBrowse
    • PARP (multi genomes: m) waspresented by Jan@Sanger
    • GenoDive was presented by Shinobu@Kazusa and Kunihiro@UT (  http://genodive.org/ -- download page is in prep)
    • CGAS (m)
    • Genome Projector was presented by Kazuharu@Keio (  http://www.g-language.org/g3 )
    • bluejay
    • X..map
    • google GenomeBrowser
    • eeDB