Day 3: Visualization Workgroup Discussion

Hands on: March 19 AM at the seminar room

Tools

• Network
  • Cytoscape
  • E-Cell 3D
  • GraphViz
  • Biocichlid
  • eeDB

• Expression
  • cytoscape
  • Genespring
  • TMeV
  • PREP (?)
  • bluejay
  • Biocichlid
  • eeDB

• Genome
  • Ensembl
  • UCSC
  • GBrowse
  • PARP (multi genomes: m)
  • GenoDive by Shinobu@Kazusa and Kunihiro@UT (  http://genodive.org/ -- download page is in prep)
  • CGAS (m)
  • Genome Projector Kazuharu@Keio (  http://www.g-language.org/g3 )
  • bluejay
  • X..map
  • google GenomeBrowser
  • eeDB