Changes between Version 45 and Version 46 of SatelliteUseCases

Timestamp:

2009/03/20 15:54:58 (16 years ago)

Author:

shuichi

Comment:

--

SatelliteUseCases

@@ -129 +129 @@
 === Requests from users to developper ===
 
- * (TO: [http://www.ebi.ac.uk/intact IntAct], Cytoscape) [[BR]]
+====TO: [http://www.ebi.ac.uk/intact IntAct], Cytoscape) ====
 It would be nice if user can retrive PPIs which are expressed in any tissues by using option function. (From: Vachiranee)[[BR]]
 
-At this moment the only way that Bruno@!IntAct knows of doing this is to get the list of proteins from a specific tissue (using [http://www.ebi.ac.uk/pride PRIDE]) and then using the list of proteins accessions to find PPIs in the molecular interaction databases, such as [http://www.ebi.ac.uk/intact IntAct]. If there is interest, we (!IntAct) could find a way to include this option in a future release.
+   *At this moment the only way that Bruno@!IntAct knows of doing this is to get the list of proteins from a specific tissue (using [http://www.ebi.ac.uk/pride PRIDE]) and then using the list of proteins accessions to find PPIs in the molecular interaction databases, such as [http://www.ebi.ac.uk/intact IntAct]. If there is interest, we (!IntAct) could find a way to include this option in a future release.
 
- * (TO: ANNOTATOR)[[BR]] 
-{{{
-In the conversation with mostly biology-oriented participants of the Hackathon,[[BR]]
-we found the following requests for ANNOTATOR to suit their needs:[[BR]]
-}}}
+==== TO: ANNOTATOR ====
+
+ * In the conversation with mostly biology-oriented participants of the Hackathon, we found the following requests for ANNOTATOR to suit their needs
+
 
    * Ability to do batch jobs, i.e. large number of proteins annotated by our software (request came from many)[[BR]]
@@ -147 +146 @@
    * Ability to save results of analysis as xml format for further analysis[[BR]]
 
- * (TO: Galaxy)[[BR]]
-   * I'd like to input the list of ID on galaxy (such as Gene ID, IPR No.) to text form of biomart filter.
+==== TO: Galaxy ====
+ * I'd like to input the list of ID on galaxy (such as Gene ID, IPR No.) to text form of biomart filter.