Changes between Version 41 and Version 42 of SatelliteUseCases

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Timestamp:
2009/03/20 15:47:59 (15 years ago)
Author:
shuichi
Comment:

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  • SatelliteUseCases

    v41 v42  
    138138we found the following requests for ANNOTATOR to suit their needs:[[BR]] 
    139139 
    140 - Ability to do batch jobs, i.e. large number of proteins annotated by our software (request came from many)[[BR]] 
    141 - ANNOTATOR should be downloadable and deployable somewhere local[[BR]] 
    142 - We were offered a potential collaboration in terms of using computing power of a Titec TSUBAME supercomputer. This means the ANNOTATOR's jobs need a mechanism to be submitted to an external site.[[BR]] 
    143 - For better results, consistency and the ability to replicate the annotator pipeline in a remote location, we need periodic and automatic updation of the underlying databases of the algorithms.[[BR]] 
    144 - How differences between ANNOTATOR and InterProscan[[BR]] 
    145 - Ability to save results of analysis as xml format for further analysis[[BR]] 
     140  * Ability to do batch jobs, i.e. large number of proteins annotated by our software (request came from many)[[BR]] 
     141  * ANNOTATOR should be downloadable and deployable somewhere local[[BR]] 
     142  * We were offered a potential collaboration in terms of using computing power of a Titec TSUBAME supercomputer. This means the ANNOTATOR's jobs need a mechanism to be submitted to an external site.[[BR]] 
     143  * For better results, consistency and the ability to replicate the annotator pipeline in a remote location, we need periodic and automatic updation of the underlying databases of the algorithms.[[BR]] 
     144  * How differences between ANNOTATOR and InterProscan[[BR]] 
     145  * Ability to save results of analysis as xml format for further analysis[[BR]] 
    146146 
    147147 * (TO: Galaxy)[[BR]] 
    148 - I'd like to input the list of ID on galaxy (such as Gene ID, IPR No.) to text form of biomart filter. 
     148  * I'd like to input the list of ID on galaxy (such as Gene ID, IPR No.) to text form of biomart filter.