Changes between Version 40 and Version 41 of SatelliteUseCases
- Timestamp:
- 2009/03/20 15:47:02 (16 years ago)
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SatelliteUseCases
v40 v41 129 129 === Requests from users to developper === 130 130 131 *(TO: [http://www.ebi.ac.uk/intact IntAct], Cytoscape) [[BR]]131 * (TO: [http://www.ebi.ac.uk/intact IntAct], Cytoscape) [[BR]] 132 132 It would be nice if user can retrive PPIs which are expressed in any tissues by using option function. (From: Vachiranee)[[BR]] 133 133 134 134 At this moment the only way that Bruno@!IntAct knows of doing this is to get the list of proteins from a specific tissue (using [http://www.ebi.ac.uk/pride PRIDE]) and then using the list of proteins accessions to find PPIs in the molecular interaction databases, such as [http://www.ebi.ac.uk/intact IntAct]. If there is interest, we (!IntAct) could find a way to include this option in a future release. 135 135 136 *(TO: ANNOTATOR)[[BR]]136 * (TO: ANNOTATOR)[[BR]] 137 137 In the conversation with mostly biology-oriented participants of the Hackathon,[[BR]] 138 138 we found the following requests for ANNOTATOR to suit their needs:[[BR]] … … 145 145 - Ability to save results of analysis as xml format for further analysis[[BR]] 146 146 147 *(TO: Galaxy)[[BR]]147 * (TO: Galaxy)[[BR]] 148 148 - I'd like to input the list of ID on galaxy (such as Gene ID, IPR No.) to text form of biomart filter.