Changes between Version 26 and Version 27 of SatelliteSeqAnalysis

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Timestamp:
2009/08/25 17:56:15 (13 years ago)
Author:
alberto.labarga
Comment:

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  • SatelliteSeqAnalysis

    v26 v27  
    2121 * [http://compbio.cs.toronto.edu/shrimp/ SHRiMP] supports letter-space (454/Solexa), color-space (Solid) and Helicos 2-pass space. Spaced-seeds followed by S-W.  
    2222 * [http://bx.psu.edu/miller_lab/dist/README.lastz-1.01.50/README.lastz-1.01.50.html Lastz] Blast(z) variant. Has parameter settings tuned for 454 and Solexa mapping for both reference based assembly and variant discovery.  
    23  * [http://emboss.sourceforge.net/ EMBOSS] 
     23 * [http://emboss.open-bio.org/wiki/Next-Generation_Sequencing_Data EMBOSS tools for NGS] 
    2424 * [http://last.cbrc.jp/ LAST] 
    2525many mores.... but never used.