Changes between Version 23 and Version 24 of SatelliteSeqAnalysis

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Timestamp:
2009/03/20 17:27:12 (16 years ago)
Author:
alberto.labarga
Comment:

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  • SatelliteSeqAnalysis

    v23 v24  
    2121[http://compbio.cs.toronto.edu/shrimp/ SHRiMP] supports letter-space (454/Solexa), color-space (Solid) and Helicos 2-pass space. Spaced-seeds followed by S-W. [[BR]] 
    2222[http://bx.psu.edu/miller_lab/dist/README.lastz-1.01.50/README.lastz-1.01.50.html Lastz] Blast(z) variant. Has parameter settings tuned for 454 and Solexa mapping for both reference based assembly and variant discovery. [[BR]] 
    23 EMBOSS [[BR]] 
     23[http://emboss.sourceforge.net/ EMBOSS] [[BR]] 
    2424many mores.... but never used. 
    2525