Changes between Version 19 and Version 20 of SatelliteG-language

Timestamp:

2009/03/20 10:41:10 (16 years ago)

Author:

gaou

Comment:

--

SatelliteG-language

@@ -10 +10 @@
  * Nobuhiro Kido
  * Kazuki Oshita
+
+
+== togoWS ==
+
+{{{
+ Name: togoWS   -   runs togoWS REST web services
+
+ Description:
+    This is a wrapper around togoWS REST web services provided at
+    http://togows.dbcls.jp/.
+    
+ Usage:
+    #search
+    @ids = togoWS(-search=>"keyword", -db=>"database");
+
+    #entry
+    $entry = togoWS(@ids);
+
+ Options:
+    -search  required option for keyword searching. 
+    -db      name of the database for searching and entry retrieval
+             required for searching, but not required for entry 
+             retrieval, since corresponding database is automatically
+             selected from the ID format. However, majority of the 
+             databases simply use large numbers as IDs, which all
+             result in "pubmed" as the databases. Therefore, use 
+             of this option is necessary for IDs that are only numbers.
+    -field   field name for entry retrieval (optional)
+    -format  format name for entry retrieval (optional)
+}}}
 
 == REST ==
@@ -54 +84 @@
    * http://www.g-language.org/gba/
  * Syntax:[[BR]]
-   * {{{http://www.g-language.org/gb/[genome]/[method]/[required input (if any)]/[option1=value]/[option2=value]...}}}
+   * {{{http://www.g-language.org/gba/[genome]/[method]/[required input (if any)]/[option1=value]/[option2=value]...}}}
  * Genome data access[[BR]]
       * examples:[[BR]]
@@ -62 +92 @@
  * Analysis methods[[BR]]
      * examples:[[BR]]
-         * http://www.g-language.org/gb/ecoli/gcskew (GC skew analysis - produces a graph)[[BR]]
-         * http://www.g-language.org/gb/ecoli/gcskew/cumulative=1 (cumulative GC skew)[[BR]]
-         * http://www.g-language.org/gb/ecoli/gcskew/at=1/cumulative=1/output=f/ (cumulative AT skew - output as csv data)[[BR]]
-         * http://www.g-language.org/gb/ecoli/gcsi (GC Skew Index analysis - single double value)
+         * http://www.g-language.org/gba/ecoli/gcskew (GC skew analysis - produces a graph)[[BR]]
+         * http://www.g-language.org/gba/ecoli/gcskew/cumulative=1 (cumulative GC skew)[[BR]]
+         * http://www.g-language.org/gba/ecoli/gcskew/at=1/cumulative=1/output=f/ (cumulative AT skew - output as csv data)[[BR]]
+         * http://www.g-language.org/gba/ecoli/gcsi (GC Skew Index analysis - single double value)
  
 == SOAP ==
+ * WSDL:
+  * http://www.g-language.org/g-language.wsdl
 
 
+