Changes between Version 56 and Version 57 of SatelliteBigData

Timestamp:

2009/03/20 14:37:22 (16 years ago)

Author:

konishi

Comment:

--

SatelliteBigData

@@ -62 +62 @@
 Protein-protein interaction datasets typically consist of a relatively small number of small objects. This type of data requires no advanced storage systems or tweaks to common systems; a simple RDBMS will do.
 Data like genome sequences and assembly data involve larger objects (1 genome sequence -> 3Gb), but are still easily manageable on a standard filesystem.
-Really big objects such as the data from simulations [IS THIS CORRECT?] require specialized storage systems such as [http://opensolaris.org/os/community/zfs/ ZFS], [http://wiki.lustre.org/index.php?title=Main_Page Lustre], [http://oss.sgi.com/projects/xfs/ XFS], [http://www.pvfs.org/ PVFS2] or future Linux filesystem [http://btrfs.wiki.kernel.org/index.php/Main_Page Brtfs].
+Really big objects such as the data from simulations [IS THIS CORRECT?] require specialized storage systems such as [http://oss.sgi.com/projects/xfs/ XFS],[http://opensolaris.org/os/community/zfs/ ZFS], [http://wiki.lustre.org/index.php?title=Main_Page Lustre],  [http://www.pvfs.org/ PVFS2] or future Linux filesystem [http://btrfs.wiki.kernel.org/index.php/Main_Page Brtfs].
 
 In contrast to the above, diffraction results, microarray results or next-gen sequencing reads involve a largish number of objects which become more difficult to query. They are typically still stored in RDBMS but might require some tweaking that digresses from a normalized relational database model, for example databases based on a key/value model (e.g. [http://www.oracle.com/technology/products/berkeley-db/index.html BerkeleyDB], [http://tokyocabinet.sourceforge.net/index.html Tokyo Cabinet],  BigTable, [http://hadoop.apache.org/core/ Hadoop] ).