= Creating an example of workflows using DDBJ-KEGG-PDBj = Member: Shigemoto (DDBJ) and Kinjo (PDBj) with some help from the KEGG people. == What we want to do == Finding pathway components (enzymes) that are expected to form physical contacts as judged from homologous protein structures. == The procedure == 1. Pick a pathway of a specific organism, say Glycolysis / Gluconeogenesis pathway of Homo sapiens (human). 1. Get all the amino acid sequences of that pathway component. 1. Run blast for each sequence against UniProt(SwissProt / TrEMBL). 1. Group the blast results according to biological species (s1, s2, ..., sn).