| Version 1 (modified by akinjo, 16 years ago) |
|---|
Creating an example of workflows using DDBJ-KEGG-PDBj
Member: Shigemoto (DDBJ) and Kinjo (PDBj) with some help from the KEGG people.
What we want to do
Finding pathway components (enzymes) that are expected to form physical contacts as judged from homologous protein structures.
Attachments
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hsa00010.gif
(18.8 KB) - added by akinjo
16 years ago.
Glycolysis pathway of human
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pdb_result.tgz
(0.8 KB) - added by yshigemo
16 years ago.
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sp_kegggene_matrix.xls
(336 bytes) - added by yshigemo
16 years ago.
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species1.gif
(95.0 KB) - added by ogishima
16 years ago.
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species2.gif
(95.0 KB) - added by ogishima
16 years ago.
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species3.gif
(95.0 KB) - added by ogishima
16 years ago.
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sp1-3_conservation.gif
(108.4 KB) - added by ogishima
16 years ago.
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Escherichia_coli_O1_K1_APEC.gif
(55.8 KB) - added by ogishima
16 years ago.
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Escherichia_coli_O139_H28_strain_E24377A_ETEC.gif
(55.8 KB) - added by ogishima
16 years ago.
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Escherichia_coli_O157_H7.gif
(55.8 KB) - added by ogishima
16 years ago.
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Escherichia_coli_O157_H7_str_EC4076.gif
(55.8 KB) - added by ogishima
16 years ago.
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Escherichia_coli_O157_H7_str_EC4196.gif
(55.8 KB) - added by ogishima
16 years ago.
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Escherichia_coli_strain_UTI89_UPEC.gif
(55.8 KB) - added by ogishima
16 years ago.
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Citrate_cycle_conservation.gif
(55.7 KB) - added by ogishima
16 years ago.
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sample.gif
(26.4 KB) - added by itoh
16 years ago.
sample map with artificial data
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sp_kegggene_matrix.2.xls
(59.1 KB) - added by yshigemo
16 years ago.
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ppi_by_species.txt
(80.4 KB) - added by yshigemo
16 years ago.
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sp_kegggene_matrix.2.tgz
(9.4 MB) - added by ogishima
16 years ago.
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sp_kegggene_matrix.3.xls
(57.4 KB) - added by yshigemo
16 years ago.
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Yersinia_pestis.gif
(25.1 KB) - added by itoh
16 years ago.
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Serratia_proteamaculans_strain_568.gif
(32.5 KB) - added by itoh
16 years ago.
