Changes between Version 5 and Version 6 of BioMart
- Timestamp:
- 2009/03/20 16:55:31 (16 years ago)
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BioMart
v5 v6 17 17 == Summary == 18 18 19 1- Collaborated with Galaxy, GBrowse and Cytoscapedevelopers for an improved BioMart Client to access BioMart databases using BioMart web services.19 1- Collaborated with [http://hackathon2.dbcls.jp/wiki/SatelliteGalaxy Galaxy], [http://gmod.org/wiki/Gbrowse GBrowse] and [http://hackathon2.dbcls.jp/wiki/SatelliteVisualization Cytoscape] developers for an improved BioMart Client to access BioMart databases using BioMart web services. 20 20 21 21 2- Hands-on session on how to use BioMart and which databases are available on BioMart Central Portal http://www.biomart.org/biomart/martview. … … 39 39 * Yunsun Nam 40 40 === Notes === 41 - have to know dataset, filter, attribute [[BR]]42 - can use Perl API, URL Access, Web service access (REST as well as SOAP) ..[[BR]]43 - MartView [[BR]]44 - DAS access [[BR]]41 - have to know dataset, filter, attribute 42 - can use Perl API, URL Access, Web service access (REST as well as SOAP) 43 - MartView 44 - DAS access 45 45 - can set up in-house server and federate your data with publicly available databases such as: http://www.biomart.org/biomart/martview 46 47 For details, see the use cases featuring BioMart: 48 49 * http://hackathon2.dbcls.jp/wiki/SatelliteUseCases 50 51 * http://hackathon2.dbcls.jp/wiki/BioMartApiRequest