Changes between Version 1 and Version 2 of BioMart

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Timestamp:
2009/03/20 14:49:54 (15 years ago)
Author:
syed
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  • BioMart

    v1 v2  
     1= BioMart - Data Integration and Interoperability = 
     2 
     3BioMart is a data-management and integration system for large scale biological data. 
     4 
     5Project page: http://www.biomart.org 
     6 
     7== Team == 
     8 
     9 * Arek Kasprzyk 
     10 * Syed Haider 
     11 
     12== Goals == 
     13 
     14 * To collaborate with data visualisation & workflow system writers towards better integration of BioMart resources over the web services. 
     15 
     16 
     17== Summary == 
     18 
     191- Collaborated with Galaxy, GBrowse and Cytoscape developers for an improved BioMart Client to access BioMart databases using BioMart web services.   
     20 
     212- Hands-on session on how to use BioMart and which databases are available on BioMart Central Portal http://www.biomart.org/biomart/martview. 
     22 
     23== Hands-on == 
     24=== Room === 
     25 * Chura Hall (3F) 
     26=== Attendess ===  
     27    * James Taylor 
     28    * Tobias Gattermayer 
     29    * Raoul Bonnal 
     30    * Mitsuteru Nakao 
     31    * Takashi Hatakeyama 
     32    * Atsuko Yamaguchi 
     33    * Kozo Nishida 
     34    * Hong-woo Chun 
     35    * Yasunori Yamamoto 
     36    * Todd Harris 
     37    * Shin Kawano  
     38=== Notes === 
    139- have to know dataset, filter, attribute[[BR]] 
    240- can use Perl API,..[[BR]] 
    341- Martview[[BR]] 
    442- DAS access[[BR]] 
    5 - can set up in-house server 
     43- can set up in-house server and federate your data with publicly available databases such as: http://www.biomart.org/biomart/martview