Changes between Version 19 and Version 20 of SatelliteG-language

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Timestamp:
2009/03/20 10:41:10 (15 years ago)
Author:
gaou
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  • SatelliteG-language

    v19 v20  
    1010 * Nobuhiro Kido 
    1111 * Kazuki Oshita 
     12 
     13 
     14== togoWS == 
     15 
     16{{{ 
     17 Name: togoWS   -   runs togoWS REST web services 
     18 
     19 Description: 
     20    This is a wrapper around togoWS REST web services provided at 
     21    http://togows.dbcls.jp/. 
     22     
     23 Usage: 
     24    #search 
     25    @ids = togoWS(-search=>"keyword", -db=>"database"); 
     26 
     27    #entry 
     28    $entry = togoWS(@ids); 
     29 
     30 Options: 
     31    -search  required option for keyword searching.  
     32    -db      name of the database for searching and entry retrieval 
     33             required for searching, but not required for entry  
     34             retrieval, since corresponding database is automatically 
     35             selected from the ID format. However, majority of the  
     36             databases simply use large numbers as IDs, which all 
     37             result in "pubmed" as the databases. Therefore, use  
     38             of this option is necessary for IDs that are only numbers. 
     39    -field   field name for entry retrieval (optional) 
     40    -format  format name for entry retrieval (optional) 
     41}}} 
    1242 
    1343== REST == 
     
    5484   * http://www.g-language.org/gba/ 
    5585 * Syntax:[[BR]] 
    56    * {{{http://www.g-language.org/gb/[genome]/[method]/[required input (if any)]/[option1=value]/[option2=value]...}}} 
     86   * {{{http://www.g-language.org/gba/[genome]/[method]/[required input (if any)]/[option1=value]/[option2=value]...}}} 
    5787 * Genome data access[[BR]] 
    5888      * examples:[[BR]] 
     
    6292 * Analysis methods[[BR]] 
    6393     * examples:[[BR]] 
    64          * http://www.g-language.org/gb/ecoli/gcskew (GC skew analysis - produces a graph)[[BR]] 
    65          * http://www.g-language.org/gb/ecoli/gcskew/cumulative=1 (cumulative GC skew)[[BR]] 
    66          * http://www.g-language.org/gb/ecoli/gcskew/at=1/cumulative=1/output=f/ (cumulative AT skew - output as csv data)[[BR]] 
    67          * http://www.g-language.org/gb/ecoli/gcsi (GC Skew Index analysis - single double value) 
     94         * http://www.g-language.org/gba/ecoli/gcskew (GC skew analysis - produces a graph)[[BR]] 
     95         * http://www.g-language.org/gba/ecoli/gcskew/cumulative=1 (cumulative GC skew)[[BR]] 
     96         * http://www.g-language.org/gba/ecoli/gcskew/at=1/cumulative=1/output=f/ (cumulative AT skew - output as csv data)[[BR]] 
     97         * http://www.g-language.org/gba/ecoli/gcsi (GC Skew Index analysis - single double value) 
    6898  
    6999== SOAP == 
     100 * WSDL: 
     101  * http://www.g-language.org/g-language.wsdl 
    70102 
    71103 
     104