Changes between Version 13 and Version 14 of Report

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Timestamp:
2009/07/21 21:15:51 (8 years ago)
Author:
mn
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  • Report

    v13 v14  
    296296developed the solutions for the issues. Galaxy is an interactive 
    297297platform to process biological data using various tools to obtain form 
    298 data sources, to analyze and to share the data. Galaxy is as a data processing hub to import from various data sources 
     298data sources, to analyze and to share the data.  
     299 
     300Galaxy is as a data processing hub to import from various data sources 
    299301such as local files, web site urls, BioMart and UCSC Genome Browser, 
    300302and to export to various applications as well. To enhance this hub 
     
    302304text-mining tools which are the rest of the Galaxy tools. We developed 
    303305two-way communication to import data from wormbase and export data to 
    304 wormbase on gbowse.  We developed the data import tool via TogoWS to extend data sources 
     306wormbase on gbowse.   
     307 
     308We developed the data import tool via TogoWS to extend data sources 
    305309including databases on the NCBI, EBI, KEGG, DDBJ and PDBj web service 
    306310API. We developed a bookmarklet to visualize the selected database ID 
     
    308312replaced by the semantics web technology. And we developed text-mining 
    309313tools against the MEDLINE abstract. Such the research line is 
    310 prospective.  On the usability issues, Galaxy could not deal with non-ascii 
     314prospective.  
     315 
     316On the usability issues, Galaxy could not deal with non-ascii 
    311317characters in the data and the messages. The characters often appear 
    312318in the gene symbols and the full text articles. And Galaxy have 
     
    318324using the standard GetText library and the UTF-8 character set. Galaxy 
    319325can use the external authentication system such as OpenID. We 
    320 developed the mod_openid based front application.  In addition, we discussed the user support materials. Although a high 
     326developed the mod_openid based front application.   
     327 
     328In addition, we discussed the user support materials. Although a high 
    321329standard of graphical user interface on the web application is too 
    322330complex to describe text, it is difficult to communicate between