Changes between Version 34 and Version 35 of DDBJ-KEGG-PDBj

Show
Ignore:
Timestamp:
2009/03/20 10:03:15 (15 years ago)
Author:
ogishima
Comment:

--

Legend:

Unmodified
Added
Removed
Modified
  • DDBJ-KEGG-PDBj

    v34 v35  
    155155== Coloring a pathway according to phylogenetic profiles == 
    156156 * Import of phylogenetic profile of a KEGG pathway 
    157  * Listing nodes and setting the corresponding colors 
    158    * If a node (gene/protein) is identified in each species, the corresponding node is colored in red in each species pathway (if not, colored in green). 
    159  * Obtaining URLs of GIF image files (colored pathways in each species according to the above color settings) by KEGG API (KeggColorPathwayByObjects) 
     157 * Setting nodes and the corresponding colors 
     158   * Species map: if a node (gene/protein) is identified in each species, the corresponding node is colored in red in each species pathway (if not, colored in green). 
     159   * Conservation map: a node (gene/protein) is colored according to an evolutionary conservation.  
     160 * Obtaining URLs of GIF image files (colored pathways according to the above color settings) by KEGG API (KeggColorPathwayByObjects) 
    160161 * Downloading colored pathways GIF image files 
     162 
    161163 
    162164== Adding edges to a pathway according to protein-protein interactions ==